// ajax function to get datasets from server
// eventually this will support users, so we can show different ones
// to different people
// ajax callback is handled by handleLoadDatasets()
function loadDatasets()
{
var dataVars = new Object;
dataVars.hgh2_mode = "getDatasets";
$.ajax({
type: "POST",
url: "/cgi-bin/hgHeatmap2",
data: dataVars,
dataType: "json",
success: handleLoadDatasets,
error: ajaxError,
cache: true
});
}
// function to handle the callback from loadDatasets
// expects a JSON obj in the data param
function handleLoadDatasets(data)
{
if(data.err)
return hghError('none',data.err);
var firstDS = '';
$.each(data, function(group,dataset)
{
var row1,row2;
$('#datasetsInnerTableBody').append("
").attr("colspan","4").appendTo(newEl);
$('#'+dsID+"HeatmapRowTableBody").append(newEl);
}
// build the row to contain the chrom/geneset labels
newEl = $("
");
});
$('#'+dsID+"FeatureSubgroupListTable").show();
$('#'+dsID+"FeatureStatsHeader").show();
$('#'+dsID+"FeatureStatsRow").show();
if(datasetsFeatureData[dsID].stats && $('#'+dsID+"FeatureSubgroupListTableBody tr").length > 0)
{
$('#'+dsID+"StatsMethod").val(datasetsFeatureData[dsID].stats);
generateStats(dsID);
}
}
if($('#'+dsID+"FeatureSubgroupListTableBody tr").length > 0)
refreshImageWithSubgrouping(dsID);
else
{
$('#'+dsID+"HeatmapRowInnerSubgroupCell").html("");
$('#'+dsID+"HeatmapRowInnerStats").hide();
}
}
// ajax call to update the list of current features, in the current sort order
function saveFeatureUpdate(el)
{
var dsID = $(el).attr("dataset");
//$('#'+dsID+"ConfigureFeatureCell").remove();
var dataVars = new Object;
dataVars.hgh2_mode = "updateFeatures";
dataVars.hgh2_dataset = dsID;
dataVars.hgh2_featureList = $('#'+dsID+'FeatureSelect').val().join(",");
// figure out sorting
if(datasetsFeatureData[dsID] && datasetsFeatureData[dsID].sortFeatures)
{
dataVars.hgh2_sortType = "feature";
dataVars.hgh2_featureSort = datasetsFeatureData[dsID].sortFeatures.join(",");
dataVars.hgh2_featureSortDir = datasetsFeatureData[dsID].sortFeaturesDirs.join(",");
}
else if(datasetsFeatureData[dsID] && datasetsFeatureData[dsID].sortGene)
{
dataVars.hgh2_sortType = "gene";
dataVars.hgh2_sortGene = datasetsFeatureData[dsID].sortGene;
dataVars.hgh2_sortDir = datasetsFeatureData[dsID].sortDir;
}
else if(datasetsFeatureData[dsID] && datasetsFeatureData[dsID].sortChromStart)
{
dataVars.hgh2_sortType = "chrom";
dataVars.hgh2_sortChromStart = datasetsFeatureData[dsID].sortChromStart;
dataVars.hgh2_sortChromEnd = datasetsFeatureData[dsID].sortChromEnd;
dataVars.hgh2_sortDir = datasetsFeatureData[dsID].sortDir;
}
if(current_user_id > 0)
{
dataVars.hgh2_tokenId = current_token_id;
dataVars.hgh2_userId = current_user_id;
}
$.ajax({
type: "POST",
url: "/cgi-bin/hgHeatmap2",
data: dataVars,
dataType: "json",
success: featureUpdateCallback,
error: ajaxError,
datasetId: dsID,
cache: true
});
}
// callback to handle the feature update, which just passes the data off to updateFeatures()
function featureUpdateCallback(data)
{
//console.log(data);
var dsID = this.datasetId;
if(data.err)
return hghError(dsID,data.err);
$("#"+dsID+"FeatureImage").attr("src",data.feature);
datasetsFeatureData[dsID].enabledFeatures = data.featureInfo;
updateFeatures(dsID);
}
// this can be written much more concisely, but works for now
// basically shift-click adds additional sorts
function sortFeature(event)
{
//var x = event.pageX - event.target.x;
var x = event.pageX - $(event.target).offset().left;
var dsID = $(event.target).attr('dataset');
var featureName;
// loop through each feature to find the one we're sorting
$.each(datasetsFeatureData[dsID].enabledFeatures, function(i,feat) {
if(feat.pixelStart <= x && feat.pixelEnd >= x)
{
featureName = feat.name;
}
});
// do we already have sorts set?
if(!datasetsFeatureData[dsID].sortFeatures)
{
datasetsFeatureData[dsID].sortFeatures = new Array();
datasetsFeatureData[dsID].sortFeaturesDirs = new Array();
}
var featureIndex = -1;
var featureDir;
// see if we're already sorting on this feature
// if so, we should just be flipping the direction
$.each(datasetsFeatureData[dsID].sortFeatures, function(i,sortingFeature)
{
if(sortingFeature == featureName)
{
featureIndex = i;
featureDir = datasetsFeatureData[dsID].sortFeaturesDirs[i];
}
});
// check for shift, which means seconary sort
if(!event.shiftKey)
{
datasetsFeatureData[dsID].sortFeatures = new Array();
datasetsFeatureData[dsID].sortFeaturesDirs = new Array();
datasetsFeatureData[dsID].sortFeatures.push(featureName);
if(featureDir == "ASC")
datasetsFeatureData[dsID].sortFeaturesDirs.push("DESC");
else
datasetsFeatureData[dsID].sortFeaturesDirs.push("ASC");
}
else
{
if(featureIndex == -1)
{
datasetsFeatureData[dsID].sortFeatures.push(featureName);
datasetsFeatureData[dsID].sortFeaturesDirs.push("ASC");
}
else
{
if(featureDir == "ASC")
datasetsFeatureData[dsID].sortFeaturesDirs[featureIndex] = "DESC";
else
datasetsFeatureData[dsID].sortFeaturesDirs[featureIndex] = "ASC";
}
}
// call the main update, which rebuilds the data and feature heatmaps
updateDataset(document.getElementById(dsID));
}
// test fxn to check out animation
function zoomImage(img)
{
//console.log(img);
var savedHeight = $(img).height();
var currWidth = $(img).width();
// img.width += 100;
//img.height = savedHeight;
$(img).animate({
width: "150%",
height: savedHeight,
left: -1*currWidth*.25
});
/* $(img).animate({
width: "100%",
height: savedHeight,
left: 0
});*/
}
// two functions to check if the mouse has stopped over the image
// for half a second, in which case we show the tooltip
// we could probably combine these into a single fxn
function heatmapImageMouseMove(event)
{
if($("#tooltip").css('display') != "none") { $("#tooltip").fadeOut('fast'); }
clearTimeout(toolTipTimeout);
toolTipTimeout = setTimeout( function() { showInfo(event); },500);
}
function featureImageMouseMove(event)
{
if($("#tooltip").css('display') != "none") { $("#tooltip").fadeOut('fast'); }
clearTimeout(toolTipTimeout);
toolTipTimeout = setTimeout( function() { showFeatureTooltip(event); },500);
}
// show the tooltip for the genomic heatmap
// genesets show the particular gene we're over, chrom shows the position
function showInfo(event)
{
//var x = event.pageX - event.target.x;
var x = event.pageX - $(event.target).offset().left;
//var y = event.pageY - event.target.y;
var y = event.pageY - $(event.target).offset().top;
var dsID = $(event.target).attr('dataset');
// fade in, if it's not shown already
if($("#tooltip").css('display') == "none") { $("#tooltip").css('opacity',.9).fadeIn('fast'); }
$("#tooltip").css('left',event.pageX+15).css('top',event.pageY+15);
var baseStart;
var baseEnd;
if(datasetsFeatureData[dsID].type == 'chrom')
{
var chromNum;
var base;
var chromStart;
var chromEnd;
$.each(datasetsFeatureData[dsID].chromInfo, function(i,chrom) {
if(chrom.pixelStart <= x && chrom.pixelEnd >= x)
{
chromNum = chrom.chromNum;
var numPixels = chrom.pixelEnd - chrom.pixelStart;
var numBases = chrom.baseEnd - chrom.baseStart;
var basesPerPixel = numBases / numPixels;
base = Math.floor((x-chrom.pixelStart)*basesPerPixel)+chrom.baseStart;
chromStart = base;
base = base+"-"+Math.floor(base+basesPerPixel);
chromEnd = Math.floor(chromStart+basesPerPixel);
}
});
var sampleID;
if($("#"+dsID).val() == 'summary')
$("#tooltip").html("
Info:
Chrom: "+chromNum+" Bases:"+base);
else
{
var ttText = "
");
}
// click handler for the features, used to show the subgrouping controls
function selectClicked(event,ui)
{
var dsID = $(event.target).attr("dataset");
var featureName = $(event.target).attr("value");
var longLabel = '';
var minVal = 0;
var maxVal = 100;
var codes = new Array;
if(datasetsFeatureData[dsID] && datasetsFeatureData[dsID].featureInfo)
{
$.each(datasetsFeatureData[dsID].featureInfo, function(i,feature) {
if(featureName == feature.name)
{
if(feature.codes)
{
codes = feature.codes;
}
else
{
minVal = feature.minVal;
maxVal = feature.maxVal;
}
longLabel = feature.longLabel;
}
});
if(!longLabel)
longLabel = featureName;
}
if(codes.length > 0)
{
//console.log(codes);
var codesSelect = "";
var codesSelectA = $(codesSelect).clone();
codesSelectA.attr('id',dsID+codesSelectA.attr('id')+'A');
var codesSelectB = $(codesSelect).clone();
codesSelectB.attr('id',dsID+codesSelectB.attr('id')+'B');
$('#'+dsID+"SubgroupConfigureCell").html(longLabel+"");
$('#'+dsID+"SubgroupConfigureCell").append("Group 1").append("").append(codesSelectA).append("");
$('#'+dsID+"SubgroupConfigureCell").append("Group 2").append("").append(codesSelectB);
$('#'+dsID+"SubgroupConfigureCell").append("");
}
else
{
var featureControlSliderA = $('#featureControlsSlider').clone()
$(featureControlSliderA).attr("id",dsID+$(featureControlSliderA).attr("id")+"A");
var featureControlSliderB = $('#featureControlsSlider').clone()
$(featureControlSliderB).attr("id",dsID+$(featureControlSliderB).attr("id")+"B");
$('#'+dsID+"SubgroupConfigureCell").html(longLabel+"");
$('#'+dsID+"SubgroupConfigureCell").append("Group 1").append(featureControlSliderA).append("").append(""+"Group 2").append(featureControlSliderB).append("").append("");
$('#'+dsID+'featureControlsSliderA').slider({range: true, min: minVal*1000, max: maxVal*1000,
slide: function(e,ui) { return (featureSliderChanging(e,ui,dsID,"A") / 1000); },
change: function(e,ui) { featureSliderChanged(e,ui,dsID,"A"); }});
$('#'+dsID+'featureControlsSliderB').slider({range: true, min: minVal * 1000, max: maxVal * 1000,
slide: function(e,ui) { return (featureSliderChanging(e,ui,dsID,"B") / 1000) },
change: function(e,ui) { featureSliderChanged(e,ui,dsID,"B"); } });
}
//console.log($(event.target).attr("value"));
}
// update the text around the slider while it's changing
function featureSliderChanging(e,ui,dsID,slider)
{
var min = $('#'+dsID+'featureControlsSlider'+slider).slider('value',0) / 1000;
var max = $('#'+dsID+'featureControlsSlider'+slider).slider('value',1) / 1000;
$('#'+dsID+'featureControlsSlider'+slider+'Val').html("Contains samples from "+min+" to "+max);
return true;
}
// update the text around the slider when it's changed
function featureSliderChanged(e,ui,dsID,slider)
{
var min = $('#'+dsID+'featureControlsSlider'+slider).slider('value',0) / 1000;
var max = $('#'+dsID+'featureControlsSlider'+slider).slider('value',1) / 1000;
$('#'+dsID+'featureControlsSlider'+slider+'Val').html("Contains samples from "+min+" to "+max);
}
// add the subgroup to the table when the add button is clicked
function addSubgroup(dsID,featName)
{
var minA = $('#'+dsID+'featureControlsSliderA').slider('value',0) / 1000;
var maxA = $('#'+dsID+'featureControlsSliderA').slider('value',1) / 1000;
var minB = $('#'+dsID+'featureControlsSliderB').slider('value',0) / 1000;
var maxB = $('#'+dsID+'featureControlsSliderB').slider('value',1) / 1000;
$('#'+dsID+"FeatureSubgroupListTable").show();
$('#'+dsID+"FeatureSubgroupListTableBody").append("
"+featName+"
"+minA+" to "+maxA+"
"+minB+" to "+maxB+"
");
$('#'+dsID+"FeatureStatsHeader").show();
$('#'+dsID+"FeatureStatsRow").show();
if($("#"+dsID).val() == "summary")
updateDataset(document.getElementById(dsID));
else
refreshImageWithSubgrouping(dsID);
}
// add the subgroup to the table when the add button is clicked
function addSubgroupCodes(dsID,featName)
{
var aCodes = $('#'+dsID+featName+"SelectA").val();
var bCodes = $('#'+dsID+featName+"SelectB").val();
var codesA = '';
var codesB = '';
if(aCodes)
codesA = aCodes.join(",");
if(bCodes)
codesB = bCodes.join(",");
$('#'+dsID+"FeatureSubgroupListTable").show();
$('#'+dsID+"FeatureSubgroupListTableBody").append("
"+featName+"
"+codesA+"
"+codesB+"
");
$('#'+dsID+"FeatureStatsHeader").show();
$('#'+dsID+"FeatureStatsRow").show();
if($("#"+dsID).val() == "summary")
updateDataset(document.getElementById(dsID));
else
refreshImageWithSubgrouping(dsID);
}
// remove the subgroup
function removeSubgroupRow(el)
{
var dsID = $(el).parent().parent().attr("dataset");
$(el).parent().parent().remove();
if($("#"+dsID).val() == "summary")
updateDataset(document.getElementById(dsID));
else
refreshImageWithSubgrouping(dsID);
}
// ajax function to get the subgrouping img
// (red/green bars next to clinical heatmap)
function refreshImageWithSubgrouping(dsID)
{
var subgroup1Features = [];
var subgroup1Mins = [];
var subgroup1Maxs = [];
var subgroup1FeatureCodes = [];
var subgroup1Codes = [];
var subgroup2Features = [];
var subgroup2Mins = [];
var subgroup2Maxs = [];
var subgroup2FeatureCodes = [];
var subgroup2Codes = [];
$('#'+dsID+"HeatmapRowInnerStats").hide(); // hide the stats if the subgrouping changes
// don't need the subgrp image if you're in summary mode
if($("#"+dsID).val() == 'summary')
{
$('#'+dsID+"HeatmapRowInnerSubgroupCell").html("");
return void(0);
}
$('#'+dsID+"FeatureSubgroupListTableBody tr").each( function() {
if($(this).attr('minA'))
{
subgroup1Features.push($(this).attr('featName'));
subgroup2Features.push($(this).attr('featName'));
subgroup1Mins.push($(this).attr('minA'));
subgroup2Mins.push($(this).attr('minB'));
subgroup1Maxs.push($(this).attr('maxA'));
subgroup2Maxs.push($(this).attr('maxB'));
}
else
{
var featureName = $(this).attr('featName');
var codesA =$(this).attr('codesA').split(",");
$.each(codesA,function(i,code) {
if(code)
{
subgroup1Codes.push(code);
subgroup1FeatureCodes.push(featureName);
}
});
var codesB =$(this).attr('codesB').split(",");
$.each(codesB,function(i,code) {
if(code)
{
subgroup2Codes.push(code);
subgroup2FeatureCodes.push(featureName);
}
});
}
});
var dataVars = new Object;
dataVars.hgh2_mode = "subgroup";
dataVars.hgh2_dataset = dsID;
dataVars.hgh2_subgroup1Features = subgroup1Features.join(",");
dataVars.hgh2_subgroup1Mins = subgroup1Mins.join(",");
dataVars.hgh2_subgroup1Maxs = subgroup1Maxs.join(",");
dataVars.hgh2_subgroup2Features = subgroup2Features.join(",");
dataVars.hgh2_subgroup2Mins = subgroup2Mins.join(",");
dataVars.hgh2_subgroup2Maxs = subgroup2Maxs.join(",");
dataVars.hgh2_subgroup1CodedFeatures = subgroup1FeatureCodes.join(",");
dataVars.hgh2_subgroup2CodedFeatures = subgroup2FeatureCodes.join(",");
dataVars.hgh2_subgroup1Codes = subgroup1Codes.join(",");
dataVars.hgh2_subgroup2Codes = subgroup2Codes.join(",");
if(datasetsFeatureData[dsID] && datasetsFeatureData[dsID].enabledFeatures)
{
var featureList = [];
$.each(datasetsFeatureData[dsID].enabledFeatures,function(i,feat) {
featureList.push(feat.name);
});
dataVars.hgh2_featureList = featureList.join(",");
}
// figure out sorting
if(datasetsFeatureData[dsID] && datasetsFeatureData[dsID].sortFeatures)
{
dataVars.hgh2_sortType = "feature";
dataVars.hgh2_featureSort = datasetsFeatureData[dsID].sortFeatures.join(",");
dataVars.hgh2_featureSortDir = datasetsFeatureData[dsID].sortFeaturesDirs.join(",");
}
else if(datasetsFeatureData[dsID] && datasetsFeatureData[dsID].sortGene)
{
dataVars.hgh2_sortType = "gene";
dataVars.hgh2_sortGene = datasetsFeatureData[dsID].sortGene;
dataVars.hgh2_sortDir = datasetsFeatureData[dsID].sortDir;
}
else if(datasetsFeatureData[dsID] && datasetsFeatureData[dsID].sortChromStart)
{
dataVars.hgh2_sortType = "chrom";
dataVars.hgh2_sortChromStart = datasetsFeatureData[dsID].sortChromStart;
dataVars.hgh2_sortChromEnd = datasetsFeatureData[dsID].sortChromEnd;
dataVars.hgh2_sortDir = datasetsFeatureData[dsID].sortDir;
}
// keep track for loads
datasetsFeatureData[dsID].subgroup1Features = subgroup1Features;
datasetsFeatureData[dsID].subgroup1Mins = subgroup1Mins;
datasetsFeatureData[dsID].subgroup1Maxs = subgroup1Maxs;
datasetsFeatureData[dsID].subgroup2Features = subgroup2Features;
datasetsFeatureData[dsID].subgroup2Mins = subgroup2Mins;
datasetsFeatureData[dsID].subgroup2Maxs = subgroup2Maxs;
datasetsFeatureData[dsID].subgroup1CodedFeatures = subgroup1FeatureCodes;
datasetsFeatureData[dsID].subgroup2CodedFeatures = subgroup2FeatureCodes;
datasetsFeatureData[dsID].subgroup1Codes = subgroup1Codes;
datasetsFeatureData[dsID].subgroup2Codes = subgroup2Codes;
if(current_user_id > 0)
{
dataVars.hgh2_tokenId = current_token_id;
dataVars.hgh2_userId = current_user_id;
}
$.ajax({
type: "POST",
url: "/cgi-bin/hgHeatmap2",
data: dataVars,
dataType: "json",
success: subgroupImgCallback,
error: ajaxError,
datasetId: dsID,
cache: true
});
//console.log(subgroup1Mins);
}
// similar to the function above, but with a stats function which means we
// should generate the stats bar below the heatmap
function generateStats(dsID)
{
var subgroup1Features = [];
var subgroup1Mins = [];
var subgroup1Maxs = [];
var subgroup1FeatureCodes = [];
var subgroup1Codes = [];
var subgroup2Features = [];
var subgroup2Mins = [];
var subgroup2Maxs = [];
var subgroup2FeatureCodes = [];
var subgroup2Codes = [];
$('#'+dsID+"FeatureSubgroupListTableBody tr").each( function() {
if($(this).attr('minA'))
{
subgroup1Features.push($(this).attr('featName'));
subgroup2Features.push($(this).attr('featName'));
subgroup1Mins.push($(this).attr('minA'));
subgroup2Mins.push($(this).attr('minB'));
subgroup1Maxs.push($(this).attr('maxA'));
subgroup2Maxs.push($(this).attr('maxB'));
}
else
{
var featureName = $(this).attr('featName');
var codesA =$(this).attr('codesA').split(",");
$.each(codesA,function(i,code) {
if(code)
{
subgroup1Codes.push(code);
subgroup1FeatureCodes.push(featureName);
}
});
var codesB =$(this).attr('codesB').split(",");
$.each(codesB,function(i,code) {
if(code)
{
subgroup2Codes.push(code);
subgroup2FeatureCodes.push(featureName);
}
});
}
});
var dataVars = new Object;
dataVars.hgh2_mode = "stats";
dataVars.hgh2_dataset = dsID;
dataVars.hgh2_type = $('#dsDisplayAs').val();
// console.log($('#'+dsID+'StatsMethod'));
dataVars.hgh2_statsFxn = $('#'+dsID+'StatsMethod').val();
if($('#'+dsID+'StatsCorrectionMethod').val() != "None")
dataVars.hgh2_statsCorrection = $('#'+dsID+'StatsCorrectionMethod').val();
dataVars.hgh2_subgroup1Features = subgroup1Features.join(",");
dataVars.hgh2_subgroup1Mins = subgroup1Mins.join(",");
dataVars.hgh2_subgroup1Maxs = subgroup1Maxs.join(",");
dataVars.hgh2_subgroup2Features = subgroup2Features.join(",");
dataVars.hgh2_subgroup2Mins = subgroup2Mins.join(",");
dataVars.hgh2_subgroup2Maxs = subgroup2Maxs.join(",");
dataVars.hgh2_subgroup1CodedFeatures = subgroup1FeatureCodes.join(",");
dataVars.hgh2_subgroup2CodedFeatures = subgroup2FeatureCodes.join(",");
dataVars.hgh2_subgroup1Codes = subgroup1Codes.join(",");
dataVars.hgh2_subgroup2Codes = subgroup2Codes.join(",");
if($('#dsDisplayAs').val()=='geneset')
{
var geneSetA = [];
$('#geneSearchDisplayOL span').each(function() {
geneSetA.push($(this).text());
});
dataVars.hgh2_geneSets = geneSetA.join(",");
}
else
{
/*if($("#chromStartPos").val())
dataVars.hgh2_chromStart = $("#chromStartPos").val();
if($("#chromEndPos").val())
dataVars.hgh2_chromEnd = $("#chromEndPos").val();*/
if($("#chromPos").val())
{
var chromPosArray = $("#chromPos").val().replace("CHR","chr").split(/-/);
dataVars.hgh2_chromStart = chromPosArray[0];
dataVars.hgh2_chromEnd = chromPosArray[1];
}
}
// keep track of the stats fxn
datasetsFeatureData[dsID].stats = $('#'+dsID+'StatsMethod').val();
if(current_user_id > 0)
{
dataVars.hgh2_tokenId = current_token_id;
dataVars.hgh2_userId = current_user_id;
}
$.ajax({
type: "POST",
url: "/cgi-bin/hgHeatmap2",
data: dataVars,
dataType: "json",
success: statsImgCallback,
error: ajaxError,
datasetId: dsID,
cache: true
});
}
function subgroupImgCallback(data)
{
var dsID = this.datasetId;
if(data.err)
return hghError(dsID,data.err);
$('#'+dsID+"HeatmapRowInnerSubgroupCell").html("");
}
function statsImgCallback(data)
{
var dsID = this.datasetId;
if(data.err)
return hghError(dsID,data.err);
$('#'+dsID+"HeatmapRowInnerStats").show();
$('#'+dsID+"HeatmapRowInnerStatsCell").html("");
$('#'+dsID+'HeatmapRowInnerFeatureCell').attr('rowspan',3);
$('#'+dsID+"HeatmapRowInnerStatsScale").html("");
}
function updateAllDatasets()
{
// a little cleanup
datasetsFeatureData['label'] = new Object;
$("#datasetsInnerTable select").each(function(index, domElement) { updateDataset(domElement); });
updateAnnotationTrack();
}
function searchGenesetsKeypress(event)
{
clearTimeout(keypressTimeout);
keypressTimeout = setTimeout( function() { searchGenes(event); },500);
}
function searchGenesKeypress(event)
{
clearTimeout(keypressTimeout);
keypressTimeout = setTimeout( function() { userSearchGenes(event); },500);
}
function searchGenes(event)
{
//console.log($(event.target).val());
var dataVars = new Object;
dataVars.hgh2_mode = "getGenesets";
if($('#geneSearchType').val() == 'geneset')
{
dataVars.hgh2_matchingGenesets = $(event.target).val();
}
else
{
dataVars.hgh2_matchingGenes = $(event.target).val();
}
if(current_user_id > 0)
{
dataVars.hgh2_tokenId = current_token_id;
dataVars.hgh2_userId = current_user_id;
}
$.ajax({
type: "POST",
url: "/cgi-bin/hgHeatmap2",
data: dataVars,
dataType: "json",
success: geneSearchCallback,
error: ajaxError,
cache: true
});
}
function geneSearchCallback(data)
{
//console.log(data);
if(data.err)
return hghError('none',data.err);
var geneSetResultHTML = '';
$.each(data.geneSets, function(i,geneSet) {
geneSetResultHTML += "
").attr('rowspan',3).attr("id",dsID+'HeatmapRowInnerFeatureCell').css('width',250);
$('#'+dsID+"HeatmapRowInner").append(newEl);
}
// build the row to contain the chrom/geneset labels
newEl = $("
" });
updateFeatures(dsID);
}
function updateFeatures(dsID)
{
var enabledFeatures = new Array();
if(!datasetsFeatureData[dsID].enabledFeatures || datasetsFeatureData[dsID].enabledFeatures.length == 0)
return;
if($("#"+dsID+"ConfigureFeatureCell").length == 0)
$('#'+dsID+"HeatmapRowInner").append("